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Identification of suitable endogenous control genes for microRNA expression profiling of childhood medulloblastoma and human neural stem cells

Medulloblastoma (MB) is the most common type of malignant childhood brain tumour.

Authors:
Genovesi LA; Anderson D; Carter KW; Giles KM; Dallas PB

Authors notes:
BMC Research Notes. 2012;5(507):1-12

Keywords:
Gene expression profiling; Medulloblastoma; MicroRNA; Neural stem cells; Quantitative RT-PCR

Abstract
Medulloblastoma (MB) is the most common type of malignant childhood brain tumour.

Although deregulated microRNA (miRNA) expression has been linked to MB pathogenesis, the selection of appropriate candidate endogenous control (EC) reference genes for MB miRNA expression profiling studies has not been systematically addressed.

In this study we utilised reverse transcriptase quantitative PCR (RT-qPCR) to identify the most appropriate EC reference genes for the accurate normalisation of miRNA expression data in primary human MB specimens and neural stem cells.